[BioC] Bioconductor commands in Unix online documentation re quest

Warnes, Gregory R gregory_r_warnes at groton.pfizer.com
Sat Jun 7 10:28:30 MEST 2003


Attached is a Unix shell script that will provide access to the R help pages
via the Unix command line.  The usage information is:

Usage: Rman [-p|--package PACKAGE] [ TOPIC ] 

Show R help information for TOPIC.  If PACKAGE is specified, the TOPIC
will be searched for within PACKAGE.  If PACKAGE is specified but not
TOPIC, help information for the package PACKAGE will be displayed.

Example:  Rman -p mva prcomp   

I hope this helps,

-Greg


> -----Original Message-----
> From: Tapan Mehta [mailto:tapmehta at yahoo.com]
> Sent: Saturday, June 07, 2003 3:07 AM
> To: John Zhang; bioconductor at stat.math.ethz.ch
> Subject: [BioC] Bioconductor commands in Unix online documentation
> request
> 
> 
> Thank you all for the help. It would be nice if I
> could know about some documentation for R/bioconductor
> commands that can be used in Unix through command
> line.
> 
> Thanks once again,
> 
> Tapan Mehta
> --- John Zhang <jzhang at jimmy.harvard.edu> wrote:
> > If you mean changing directory from within R, then
> > getwd() returns the working 
> > directory and setwd("your/working/dir") changes the
> > working directory to 
> > your/working/dir.
> > 
> > >Date: Fri, 6 Jun 2003 13:03:32 -0700 (PDT)
> > >From: Tapan Mehta <tapmehta at yahoo.com>
> > >To: bioconductor at stat.math.ethz.ch
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> > >Subject: [BioC] change working directory command on
> > command line
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> > >
> > >Hello,
> > >
> > >i am trying to run Bioconductor on Unix. I am
> > invoking
> > >R typing R on the command line. I believe there is
> > no
> > >Gui available for the Unix version. It would be
> > nice
> > >if somebody could tell me how to change the working
> > >directory on command line.
> > >
> > >Tapan Mehta
> > >
> > >_______________________________________________
> > >Bioconductor mailing list
> > >Bioconductor at stat.math.ethz.ch
> >
> >https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor
> > 
> > Jianhua Zhang
> > Department of Biostatistics
> > Dana-Farber Cancer Institute
> > 44 Binney Street
> > Boston, MA 02115-6084
> > 
> > _______________________________________________
> > Bioconductor mailing list
> > Bioconductor at stat.math.ethz.ch
> >
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