[BioC] Re: Opening a .DAT
Tapan Mehta
tapmehta@yahoo.com
Wed, 12 Feb 2003 06:55:48 -0800 (PST)
Hello,
Thanks a lot for your help. I will try this option and
get back to you if required. Thanks once again.
Tapan
--- Alberto de Luis Calvo <aldeluis@usal.es> wrote:
> Yes, you can open a DAT file in Photoshop with the
> CLS and RWS
> parameters
> given in the DAT header or the CEL header, (actually
> the image
> dimensions in pixels).
>
> (example for hgu133a)
>
> CLS=4733
> RWS=4733
>
> (example for TEST3)
>
> CLS=1167
> RWS=1167
>
> You can type this dimensions in the "Raw Options"
> dialog of photoshop,
> set "Depth" to 16 Bits, "Byte Order" to IBM PC and
> click in "Guess"
> button to leave photoshop to set the Header Size (in
> these cases: 512
> byte).
>
>
> In adition to Byron Ellis (bellis@hsph.harvard.edu)
> Date: Tue, 11 Feb 2003 22:37:20 -0500
>
> > AFAIK the Affymetrix DAT format is actually very
> simple (though its
> > been quite some time since I looked at a DAT
> file). It is just a block
> > of 16-bit intensity values in a simple raw format
> after a 512-byte
> > header. The header contains the gridding
> information and well as the
> > image extents... If you have photoshop around,
> you can actually open
> > the DAT file in Photoshop using the "RAW" file
> format if you like :-)
>
> ...............................................
> Alberto de Luis (aldeluis@usal.es)
> Centro de Investigación del Cáncer
> Cancer Research Center
> Campus Miguel de Unamuno 37007
> Salamanca (Spain)
> ...............................................