[BioC] Recent changes to Bioconductor packages

madman at jimmy.harvard.edu madman at jimmy.harvard.edu
Sat Aug 23 06:00:02 MEST 2003


This is an automated message sent out weekly to report recent changes
to Bioconductor packages.  Please see the URL 
http://www.bioconductor.org/changelog.html for a complete history of 
changes.  Unless otherwise noted, these changes apply to the developmental
packages only.
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August 21, 2003: AnnBuilder - New function, map2LL, that creates a data 
         package with mappings between LocusLink ids to GO, RefSeq, and 
         UniGene ids and vice versa and, chrLocPkgBuilder, that creates 
         a data package with mappings between LocusLink ids and chromosomal 
         locations were added. JZ
 
August 20, 2003: annotate - a new function findNeighbors was added to allow 
         users to find genes neighboring a given gene or genes within a 
         region on a chromosome using CHRLOC data packages. JZ

August 20, 2003: MetaData - three new data packages namely humanCHRLOC, 
         mouseCHRLOC, and ratCHRLOC were added. The packages contain
         chromosomal location data that can be used to locate genes
         within a given region of a chromosome or genes neighboring a 
         given target gene. JZ

August 20, 2003: Rgraphviz - Fixed a bug where node colours were not 
         being honoured in the plotting routine when ellipse shape was
         specified.  JG

August 20, 2003: daMA - new package added.  JG



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