[BioC] normalization in limma

Gordon Smyth smyth at wehi.edu.au
Tue Aug 19 10:28:41 MEST 2003


At 03:05 AM 19/08/2003, you wrote:
>Dear all:
>
>I'm trying to use limma package. But my intensity data is not two-colored, 
>but single color(gray), like the following:
>
>Gene1   2596.87    2429.06    2436.62  2716.21      2508.85     2391.20 
>       2515.86     2583.28
>Gene2   1083.47    1071.37    1087.75  1022.47      1144.77     1078.31 
>       1007.18     841.17
>
>
>How should I do the normalization in Limma? Any guidance is appreciated.

See also

   https://www.stat.math.ethz.ch/pipermail/bioconductor/2003-June/001772.html

for a little more discussion.

Cheers
Gordon

>Chunrong



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