[BioC] Affy : CDF problems

Girardot Fabrice fabericus at yahoo.fr
Thu Aug 7 16:47:57 MEST 2003


Hi again,
=20
My problem was effectivelly a too long line in the headers of the .cel file=
s... My install of R and Bioconductor is up to date, so it should have the =
modif that you mention (but I didn't check that). What I did was simply to =
reduce the size of the descriptive field in the headers from :

DatHeader=3D[32..46261]  bacterial infection t0 array2 scan2[...]=14 DrosGe=
nome1.1sq =14  =14  =14  =14  =14  =14  =14  =14  =14 6

to :

DatHeader=3D[49..46275]  b inf t0 array2 scan2[...]=14 DrosGenome1.1sq =14 =
 =14  =14  =14  =14  =14  =14  =14  =14 6

and now it works nicely !
=20
Simon, thanks a lot !
=20
--
Fabrice Girardot
Equipe Biologie Virtuelle
UMR 6543
Nice, France



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