[BioC] how to convert expression set data into matrix data ?
Jean Yee Hwa Yang
jean at biostat.ucsf.edu
Sun Aug 3 19:36:09 MEST 2003
Hi Anne,
Use
data <- exprs(B)
You will find more information from the Biobase vignettes.
Jean
On Fri, 1 Aug 2003, Anne Sauve wrote:
> Hello,
>
> I am trying to convert some expression set data into a matrix format
> in order to do computations on them.
>
> The way I do it now is in 3 steps:
>
> write.exprs(B[,14],file="B.txt")
> B = read.table("B.txt")
> Bmat = as.matrix(Bmat)
>
> where B is an expression set with 15 samples and 12626 genes.
>
> Is there a more direct way of doing that conversion ?
>
> Thanks for your help,
>
> Anne
>
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