That's the correct basic usage, but how about an error message or a little
more context?

On Wed, Jan 5, 2011 at 2:08 PM, Ivan Gregoretti <ivangreg@gmail.com> wrote:

> I tried to use it to the best of my understanding:
>
> stack(LargeListOfSmallRangedData, indName='space')
>
> I think that the failure is due to misuse from my part rather than a bug.
>
> Ivan
>
>
>
>
> On Wed, Jan 5, 2011 at 4:51 PM, Michael Lawrence
> <lawrence.michael@gene.com> wrote:
> > Well it would be good to see what you tried. I think there are some
> critical
> > bug fixes to stack in devel, but not release, so I would try with devel.
> >
> > Michael
> >
> > On Wed, Jan 5, 2011 at 1:13 PM, Ivan Gregoretti <ivangreg@gmail.com>
> wrote:
> >>
> >> Hi Michael,
> >>
> >> Actually, I tried consolidating the list with stack() but I failed.
> >> Perhaps there is no need to change anything but only show how the
> >> consolidation is done with stack().
> >>
> >> Would you mind showing it for the record?
> >>
> >> Thank you,
> >>
> >> Ivan
> >>
> >>
> >>
> >>
> >> On Wed, Jan 5, 2011 at 4:05 PM, Michael Lawrence
> >> <lawrence.michael@gene.com> wrote:
> >> >
> >> >
> >> > On Wed, Jan 5, 2011 at 12:45 PM, Ivan Gregoretti <ivangreg@gmail.com>
> >> > wrote:
> >> >>
> >> >> It works. Thanks, Martin.
> >> >>
> >> >> It would be nice to have a pointer to this functionality in the
> >> >> documentation. For instance, when I do ?RangedData, I can see a
> >> >> RangedData constructor and coercion options. However, ?RangedDataList
> >> >> reports its constructor but no coercion.
> >> >>
> >> >
> >> > It's not a coercion in the strict sense. The rbind method is
> documented
> >> > for
> >> > RangedData. Also, RangedDataList has a stack method for rbind'ing them
> >> > and
> >> > adding a factor column indicating the source of each record. The
> >> > "unlist"
> >> > method on RangedDataList is a bit strange: it does a do.call(c, list)
> >> > instead of do.call(rbind, list). I'm thinking about changing that.
> >> >
> >> > Michael
> >> >
> >> >>
> >> >> Again, thank you.
> >> >>
> >> >> Ivan
> >> >>
> >> >>
> >> >>
> >> >>
> >> >> On Wed, Jan 5, 2011 at 3:23 PM, Martin Morgan <mtmorgan@fhcrc.org>
> >> >> wrote:
> >> >> > On 01/05/2011 12:12 PM, Ivan Gregoretti wrote:
> >> >> >> Hello BioC listers,
> >> >> >>
> >> >> >> Is there a function that will take a list of RangedData instances
> >> >> >> and
> >> >> >> consolidate them into a large RangedData instance?
> >> >> >
> >> >> > do.call(rbind, LargeListOfSmallRangedData)
> >> >> >
> >> >> > ?
> >> >> > Martin
> >> >> >>
> >> >> >> I'm looking for this:
> >> >> >>
> >> >> >> bigRangedData <- someFunction( LargeListOfSmallRangedData )
> >> >> >>
> >> >> >> Thank you,
> >> >> >>
> >> >> >> Ivan
> >> >> >>
> >> >> >> _______________________________________________
> >> >> >> Bioc-sig-sequencing mailing list
> >> >> >> Bioc-sig-sequencing@r-project.org
> >> >> >> https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
> >> >> >
> >> >> >
> >> >> > --
> >> >> > Computational Biology
> >> >> > Fred Hutchinson Cancer Research Center
> >> >> > 1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109
> >> >> >
> >> >> > Location: M1-B861
> >> >> > Telephone: 206 667-2793
> >> >> >
> >> >>
> >> >> _______________________________________________
> >> >> Bioc-sig-sequencing mailing list
> >> >> Bioc-sig-sequencing@r-project.org
> >> >> https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
> >> >
> >> >
> >
> >
>

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