Hi everybody,

How do you sort a RangedData instance by start values?



For instance, I have this example

AannotatedRd[,0]

RangedData with 10112 rows and 0 value columns across 25 spaces
             space               ranges |
      <character>            <IRanges> |
00029        chr1 [15794022, 15797422] |
00003        chr1 [ 5073247,  5076647] |
00004        chr1 [ 5503788,  5507188] |
00008        chr1 [ 6950752,  6954152] |
00010        chr1 [ 9072689,  9076089] |
00011        chr1 [ 9533772,  9537172] |
00019        chr1 [11535104, 11538504] |
00020        chr1 [11542979, 11546379] |
00021        chr1 [12113768, 12117168] |
00028        chr1 [14635606, 14639006] |
...
<10102 more rows>

(The next chromosome looks equally disordered)

As you can see, the first row should not be at the top of the list.

If this was a data.frame instance, I could solve it in no time with order().

How do you sort RangedData instances by start values (while keeping spaces
separated)?

Thank you,

Ivan Gregoretti, PhD
National Institute of Diabetes and Digestive and Kidney Diseases
National Institutes of Health
5 Memorial Dr, Building 5, Room 205.
Bethesda, MD 20892. USA.
Phone: 1-301-496-1592
Fax: 1-301-496-9878

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