Hello everyone.

The question may have been asked and answered already : I am looking for a
list of packages I
could use for Illumina paired - end sequencing analysis (apart from MACS)
or/and for Illumina
mRNA sequencing analysis (apart from ERANGE package).  Any suggestions would
be much appreciated, especially if any analysis modules are available in
R/BioC.

thanks very much,

bogdan

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