[Bioc-sig-seq] findOverlaps select argument

Dario Strbenac D.Strbenac at garvan.org.au
Wed Sep 1 03:00:13 CEST 2010


Hello,

In the documentation, it says that "When select is "all", the results are returned as a RangesMatching object. When select is "first", "last", or "arbitrary" the results are returned as ... ".

But in using this, it seems only two of the arguments are accepted in the code.

> ol <- findOverlaps(gr1, gr2, select = "arbitrary")
Error in match.arg(select) : 'arg' should be one of “all”, “first”

--------------------------------------
Dario Strbenac
Research Assistant
Cancer Epigenetics
Garvan Institute of Medical Research
Darlinghurst NSW 2010
Australia


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