[Bioc-sig-seq] GenomicRanges wishlist: IntervalTrees for GRanges

Kasper Daniel Hansen kasperdanielhansen at gmail.com
Fri Oct 1 03:48:47 CEST 2010

I would like to see 'IntervalTrees for GRanges'.  Specifically, if I
am repeatedly doing findOverlaps lookups on a big GRanges, I want to
be able to store the IntervalTrees that (right now?) gets computed
each time.

This may of course already exist, in which case I would be satisfied
with a pointer :)


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