[Bioc-sig-seq] ShortRead and Solexa GA(II)

[Martin Morgan]

Hi Matthew --

Matthew McCormack wrote:
>  Solexa's Genome anlyzer II now uses 100 tiles per lane, and I was
> wondering if this would have any affect when using ShortRead in which I
> noticed the examples provided in the pdf were with 300 tiles per lane.

This only matters for generation of the per tile elements of the qa
report, and ShortRead uses a simple heuristic to guess appropriately.
There should not be a problem, but let me know if there is.

Martin

> 
> Matthew McCormack
> 
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-- 
Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
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