[Bioc-sig-seq] readAligned and BAM format

Joern Toedling Joern.Toedling at curie.fr
Mon Nov 2 12:14:41 CET 2009

Hi everyone,

has anybody by chance already written a parser for importing alignments in
BAM/SAM format into objects of class AlignedRead? This format seems to be
gaining more and more support, yet it is still absent from the options in
function readAligned. If one of you already has written such a parsing
function and would not mind sharing it, please let me know.

Best regards,

Joern Toedling
Institut Curie -- U900
26 rue d'Ulm, 75005 Paris, FRANCE
Tel. +33 (0)156246926

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