[Bioc-sig-seq] Standard 454 quality checks?

Dan Bolser dan.bolser at gmail.com
Thu Apr 23 17:36:43 CEST 2009


Sorry for the noob question, but is there a set of standard quality
checks in R that I can run over some 454 data? I have the fasta and
the fasta format quality files as well as an sff. I scanned the manual
for the ShortReads package, but it seems focused on Illumina, I
couldn't pick out the general bits from the specifics.

Thanks for any help,
Dan.



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