this would be stupendously useful (or at least I would use it all the time)

*He that would live in peace and at ease, *
*Must not speak all he knows, nor judge all he sees.*
*
*
Benjamin Franklin, Poor Richard's
Almanack<http://archive.org/details/poorrichardsalma00franrich>


On Fri, Nov 1, 2013 at 10:11 AM, Michael Lawrence <lawrence.michael@gene.com
> wrote:

> Hi guys,
>
> What do you think about taking transcriptLocs2refLocs and giving it a
> higher level interface, for example one that takes a list of positions and
> a GRangesList? Mapping from transcript/cds space to genomic space is a
> useful feature, but it's currently hidden away behind this low-level
> interface in the GenomicFeatures package. We could push it (or at least
> more of the internals) into GenomicRanges. And make another method (in
> addition to the GAlignments one) for the as-yet-unexported prmap generic
> (feel free to rename). Somehow there needs to be consistency for these
> coordinate space mapping operations.
>
> Michael
>
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