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I developed a new package for conducting meta-analysis of RNA-seq count data.It is named "metaSeq".metaSeq can combine multiple datasets in different studies for retrieving commonly detected DEGs (differentially expressed genes).By meta-analysis, much reliable DEGs are expected to be detected.Actually, my demo data (breast cancer cell / normal cell) shows better result in using enrichment analysis.
Some functions use snow package against further scale-up of datasets.I also plan to customize some scripts as C++ code.
Please use my package if you like it and let me know if you have any questions or comments.

Best,
Koki Tsuyuzaki
####################################################Koki TsuyuzakiDepartment of Medical and Life Science,
Faculty of Pharameutical Science,
Tokyo University of Science, JapanHome page : http://kokitsuyuzaki.site44.com/index-eg.html####################################################




 		 	   		  
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