My gCMAP package also throws this warning. I have been trying to find the
guilty .path.package() through several layers of CRAN dependencies already,
but am still looking.

In case I cannot find / convince the author of the package containing
the .path.package() call to correct the function call: Is there anything
else I can do to deal with this warning other than removing the dependency ?

Thanks,
Thomas


On Tue, Mar 5, 2013 at 2:03 PM, Dan Tenenbaum <dtenenba@fhcrc.org> wrote:

> On Tue, Mar 5, 2013 at 1:29 PM, Elana Fertig <ejfertig@jhmi.edu> wrote:
> > I'm having a similar problem with my package, CoGAPS, which Is giving a
> warning for .path.package that does not appear to be anywhere in my code,
> nor does it depend on Biobase.  Any suggestions would be greatly
> appreciated!
>
> This means a package that you depend on, or some upstream dependency,
> stil calls .path.package(). In your case it's the gdata package frm
> CRAN.
> Dan
>
>
> >
> > Elana
> >
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-- 
Thomas Sandmann
Computational biologist

Genentech, Inc.
1 DNA Way
South San Francisco, CA 94080
USA

Phone: +1 650 225 6273
Fax: +1 650 225 5389
Email: sandmann.thomas@gene.com

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