Thank you, both.  I will gladly ignore the warning
 :).

On Tue, Sep 25, 2012 at 2:48 PM, Martin Morgan <mtmorgan@fhcrc.org> wrote:

> On 09/25/2012 09:05 AM, Diego Diez wrote:
> > Hi Levi,
> >
> > I had a similar issue with my package (codelink). The problem was the
> > importFrom call in the NAMESPACE file. In my case importFrom(annotate,
> > lookUp, htmlpage). I could temporarily avoid the warnings by
> > commenting out that line and moving package annotate from Imports to
> > Depends in the DESCRIPTION file. However, I imagine it is better to
> > solve the original problem which I am not sure where it is. At least
> > the following thread seems to be related (although it was supposed to
> > be fixed).
> >
> > https://stat.ethz.ch/pipermail/r-devel/2012-April/063802.html
>
> Please IGNORE the warning
>
> Warning: found methods to import for function "as.list" but not the
> generic itself
>
> (possibly with a different method listed).
>
> There are many false positives, and there is a fix (now in R-patched,
> but not in the R used by the build systems or in use by most users).
>
> Diego you are right that the error should be corrected, not the symptom,
> so you do NOT want to comment out the importFrom or change the Depends:
> versus Imports: tag in the DESCRIPTION file.
>
> Martin
>
> >
> > Hope this helps,
> > Diego
> >
>
>
> --
> Computational Biology / Fred Hutchinson Cancer Research Center
> 1100 Fairview Ave. N.
> PO Box 19024 Seattle, WA 98109
>
> Location: Arnold Building M1 B861
> Phone: (206) 667-2793
>



-- 
Levi Waldron
Post-doctoral fellow
Department of Biostatistics, Harvard School of Public Health
Department of Biostatistics and Computational Biology, Dana-Farber Cancer
Institute
Building 1, room 412C
655 Huntington Avenue
Boston, Massachusetts 02115
mobile: (617) 851-6849
fax: (617) 432-5619
http://www.hsph.harvard.edu/research/levi-waldron/

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