    
Dear all, 
How are you ? 
I am using the oligo,
1.4.0 package to analyse my Nimblegen array. 
I am working on
Linux_Ubuntu(hardy), 8.4.1, I recently succeeded to have the R-2.7.0
version and I am working with it. 
The problem I am facing
right now is in the  read.xysfiles() function. When I use this
function to read my xys files, I get the error message 
    Error in
geometry(get(pkgname)) : 
    no slot of
name "geometry" for this object of class "platformDesign" 

My sessionInfo()
is : 
>
sessionInfo() 
R version 2.7.0
(2008-04-22) 
x86_64-unknown-linux-gnu 
locale: 
LC_CTYPE=en_GB.UTF-8;LC_NUMERIC=C;LC_TIME=en_GB.UTF-8;LC_COLLATE=en_GB.UTF-8;LC_MONETARY=C;LC_MESSAGES=en_GB.UTF-8;LC_PAPER=en_GB.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_GB.UTF-8;LC_IDENTIFICATION=C 
attached base
packages: 
[1] splines  
tools     stats     graphics  grDevices utils     datasets 
[8] methods  
base 
other attached
packages: 
[1] oligo_1.4.0   oligoClasses_1.2.0 
[3]
affxparser_1.12.2                  AnnotationDbi_1.2.2 
[5]
preprocessCore_1.2.0               RSQLite_0.6-9 
[7] DBI_0.2-4     Biobase_2.0.1 
[9]
pd.080429.em.mm9.chrx.tiling_1.4.0 

If you have any
idea please drop me a line  
With kind regard,  
eskeatnaf  


      
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