[Bioc-devel] Regarding package parati: Bioc 3.24 builders use Pandoc 2.7.3 but rmarkdown 2.32 requires >= 2.8

Jinyi Che chej|ny|777 @end|ng |rom gm@||@com
Fri Sep 4 08:22:33 CEST 2026


Dear Bioconductor Team,

I'm writing regarding the error reported for my package 'parati'.

parati 1.1.0 now fails during R CMD build on both nebbiolo2 and lconway.
The vignette error is:

  pandoc version 2.8 or higher is required and was not found

Both node-info pages report Pandoc 2.7.3, while both builders installed
rmarkdown 2.32 on 2026-09-01. rmarkdown 2.32 raised its minimum Pandoc
version from 1.14 to 2.8. This appears to be a builder image mismatch,
not a package-specific failure.

nebbiolo2 log:
https://bioconductor.org/checkResults/3.24/bioc-LATEST/parati/nebbiolo2-buildsrc.html

lconway log:
https://bioconductor.org/checkResults/3.24/bioc-LATEST/parati/lconway-buildsrc.html

Could you please help to check the issue and inform me of the next steps?
Thanks!

best
jinyi

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