[Bioc-devel] Shiny.gosling undeprecation

[Angelo Velle]

Good morning,
Sorry if I bother again. The developer of shiny.gosling told me that he
wrote for the undeprecation, but I see that it still has problems. Since my
package won't be available in the next release without their fix, do you
have any update? Unfortunately removing the dependency would be complicated
since their functions are an important part of my shiny app.
Best Regards,
Angelo Velle

Il giorno mer 22 apr 2026 alle ore 11:47 Angelo Velle <angelo.velle using unipd.it>
ha scritto:

> Thank you for the update, I'll tell them.
>
> Il giorno mer 22 apr 2026 alle ore 11:41 Kern, Lori <
> Lori.Shepherd using roswellpark.org> ha scritto:
>
>> Shiny.gosling is still failing.  It looks like there may have been a push
>> today which wont be available until tomorrows report.  We can check on
>> tomorrows report to see if it is actually building without error.
>>
>> However, once the package is building Ok  the shiny.gosling maintainer
>> will need to reach out themselves to ask for undeprecation.  We want to
>> ensure they understand Bioconductor policies of being responsive; several
>> emails went unanswered/ignored.
>>
>> Lori Kern
>>
>> Bioconductor Core Team
>>
>> Roswell Park Comprehensive Cancer Center
>>
>> Department of Biostatistics & Bioinformatics
>>
>> Elm & Carlton Streets
>>
>> Buffalo, New York 14263
>> ------------------------------
>> *From:* Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of
>> Angelo Velle <angelo.velle using unipd.it>
>> *Sent:* Wednesday, April 22, 2026 11:35 AM
>> *To:* bioc-devel using r-project.org <bioc-devel using r-project.org>
>> *Subject:* [Bioc-devel] Shiny.gosling undeprecation
>>
>> Good morning,
>> I'm the maintainer of the gINTomics package, one of my dependencies
>> (shiny.gosling) has been deprecated. I talked with the maintainer and he
>> told me that he recently pushed the fixes to the devel. Can you please
>> confirm the undeprecation of the package ?
>> Thank You
>> Angelo Velle
>> --
>> Angelo Velle, PhD
>>
>> Department of Biology
>>
>> University of Padova, Italy
>>
>> Via U. Bassi 58/B
>>
>> 35131 Padova
>>
>> +39 049 8276319
>>
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