[Bioc-devel] ExpHunterSuite workflow package failing build - now fixed - but build not until Tuesday, after deadline

[Kern, Lori]

Yes workflows are currently only built once a week . The schedule of builds can be found on the report home page: https://bioconductor.org/checkResults/

I can confirm the changes were pushed to git.bioconductor.org.

We wont force a rebuild but the package will continue into the next release.  Please keep an eye on the builds and just be aware any fixes needed AFTER the release will need to be pushed to both RELEASE_3_23 (created next week) and devel to fix both branches.

Thank you for your continued effort to resolve this issue and contributions to Bioconductor.



Lori Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of James Richard Perkins via Bioc-devel <bioc-devel using r-project.org>
Sent: Thursday, April 23, 2026 6:14 AM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: [Bioc-devel] ExpHunterSuite workflow package failing build - now fixed - but build not until Tuesday, after deadline

Hi,

I'm the author of the workflow package ExpHunterSuite.

It was failing build/check in devel, due to imported functions moving
between packages.

I've fixed (using the bioconductor devel docker) and pushed to devel
yesterday.

However, the build report doesn't reflect the commit .. perhaps because the
snapshot is taken weekly for the workflows?

https://secure-web.cisco.com/1CKZqOVr71usLGcIsOQQyt55TQAMAdx3u4uyRuZid8zIdIzGeNy_LJpK-da0cOBzdDgnbalfiPqClSAxMfheXUP-6iV37h7UCj2kwBQKjqiSixz3iRqacHwXHSW11ylTWRbbPt6QAHExnz5N_BheAJvHZpXcS3W9dPcIzUSvefAxBRVKZ3w-8WE9qu0sQMX3h69GuBvgbZFskfs3SYi74BxV0vRi0oa6XqtDkEedEujmXKLML4uwL4_H1eNq1xEE1XsoNGzFXbrzPFI_XpVridL3nxSAY7lYkO8T7yrvCGoTRTXFN9f1Q8OXhM4gh25xW/https%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.23%2Fworkflows-LATEST%2FExpHunterSuite%2Fnebbiolo1-install.html
git_last_commit_date: 2025-10-29 09:47:33 -0400 (Wed, 29 Oct 2025)

Also - as it is a workflow package - it's not due to be built again until
next Tuesday - so I can't know for sure the fix has worked on devel until
it's too late (deadline is this Friday).

Is there a way to force the build for this package?

Kindest regards

Jim

--
James R Perkins PhD
Associate Professor
Department of Molecular Biology and Biochemistry
<https://secure-web.cisco.com/18u2Y6slLpOGF2DwVZdC58khQaE4_jf6Mtim4UadqEuSxAHXLL8pmesl3Hn3ZrDFR1OrqLUNM1Ef9lHOAEj8dg36y5QNMajWTKpvuNOfgmqQuDqPTkrtjthJT9earIw-AH7NVNCa4vjY0FQEGd3I037rJ4CxM64py0F0aQrnLuccsM6zQm_mboGX-RHODdOjlSXsZc01h8pBX2sAxZNIEd5xP71Hvcy88Ydg0svmZBkr5dOhwsFLpzkriJ3c9Evs8Xgr5uJJ7a3Qsph9JSU60Lm0sfM0dJgKXMj0QU1943uDg6Ity4f8WGn_3t9W3wHTX/https%3A%2F%2Fgoo.gl%2Fmaps%2FUCLQXZLR2W12>
Science Faculty, University of Malaga
29071 Malaga, Spain

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