[Bioc-devel] OncoSimulR Timeout on kunpeng2 during vignette build

Ramon Diaz-Uriarte rd|@z02 @end|ng |rom gm@||@com
Tue Apr 21 13:37:43 CEST 2026


Dear All,

A package I maintain, OncoSimulR, now on version 4.13.4,  is showing a TIMEOUT on kunpeng2 (https://bioconductor.org/checkResults/devel/bioc-LATEST/OncoSimulR/), apparently during the vignette build process (https://bioconductor.org/checkResults/devel/bioc-LATEST/OncoSimulR/kunpeng2-buildsrc.html).

I do not understand what is happening, nor how to debug this, since al the logs show is

* checking for file ‘OncoSimulR/DESCRIPTION’ ... OK
* preparing ‘OncoSimulR’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ...

The package does not seem to show this issue in  the (supported) platforms in R universe (https://bioc.r-universe.dev/OncoSimulR#checktable).

I've noticed there are at least some other packages with a similar pattern: they seem to build and check OK on all platforms, but timeout on vignette build on kunpeng2. Is there anything I should do?

Best,

R.


--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-31
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain

Phone: +34-91-497-2412

Email: rdiaz02 using gmail.com
       r.diaz using uam.es
       ramon.diaz using iib.uam.es

https://ligarto.org/rdiaz



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