[Bioc-devel] Bioconductor 3.21 db0s, OrgDbs, and TxDbs now available

[Kern, Lori]

Hello Bioconductor community,

The newest db0, OrgDb, and TxDb annotation packages for the upcoming Bioconductor 3.21 release are up and available for download in the devel version of Bioconductor.

The deadline for submitting contributed annotation packages will be Wednesday April 9th

The new db0 packages are:
anopheles.db0_3.21.0.tar.gz
arabidopsis.db0_3.21.0.tar.gz
bovine.db0_3.21.0.tar.gz
canine.db0_3.21.0.tar.gz
chicken.db0_3.21.0.tar.gz
chimp.db0_3.21.0.tar.gz
ecoliK12.db0_3.21.0.tar.gz
ecoliSakai.db0_3.21.0.tar.gz
fly.db0_3.21.0.tar.gz
human.db0_3.21.0.tar.gz
malaria.db0_3.21.0.tar.gz
mouse.db0_3.21.0.tar.gz
pig.db0_3.21.0.tar.gz
rat.db0_3.21.0.tar.gz
rhesus.db0_3.21.0.tar.gz
worm.db0_3.21.0.tar.gz
xenopus.db0_3.21.0.tar.gz
yeast.db0_3.21.0.tar.gz
zebrafish.db0_3.21.0.tar.gz

The new OrgDb packages are:

GO.db_3.21.0.tar.gz
org.Ag.eg.db_3.21.0.tar.gz
org.At.tair.db_3.21.0.tar.gz
org.Bt.eg.db_3.21.0.tar.gz
org.Ce.eg.db_3.21.0.tar.gz
org.Cf.eg.db_3.21.0.tar.gz
org.Dm.eg.db_3.21.0.tar.gz
org.Dr.eg.db_3.21.0.tar.gz
org.EcK12.eg.db_3.21.0.tar.gz
org.EcSakai.eg.db_3.21.0.tar.gz
org.Gg.eg.db_3.21.0.tar.gz
org.Hs.eg.db_3.21.0.tar.gz
org.Mm.eg.db_3.21.0.tar.gz
org.Mmu.eg.db_3.21.0.tar.gz
org.Pf.plasmo.db_3.21.0.tar.gz
org.Pt.eg.db_3.21.0.tar.gz
org.Rn.eg.db_3.21.0.tar.gz
org.Sc.eg.db_3.21.0.tar.gz
org.Ss.eg.db_3.21.0.tar.gz
org.Xl.eg.db_3.21.0.tar.gz
Orthology.eg.db_3.21.0.tar.gz
PFAM.db_3.21.0.tar.gz

The new TxDb packages are:

TxDb.Hsapiens.UCSC.hg38.knownGene_3.21.0.tar.gz
TxDb.Mmusculus.UCSC.mm39.knownGene_3.21.0.tar.gz


The OrgDbs and TxDbs have also been added to AnnotationHub.

Thank you




Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263


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