[Bioc-devel] Rust compilation environment in Bioconductor
Sun Wenjie
@unwj|e @end|ng |rom gm@||@com
Tue Mar 4 00:40:22 CET 2025
Hello,
I recently tried to translate Rcpp to Rust using extendr for my package. However, I encountered a compilation error in Bioc.
I'm unsure whether the issue is with my package configuration or if Bioconductor lacks the necessary Rust environment. Could someone provide some suggestions?
Here is the Bioc checkResults:
https://www.bioconductor.org/checkResults/3.21/bioc-LATEST/CellBarcode/
The main problem is the absence of `cargo`, as indicated by the error message:
`/bin/sh: line 6: cargo: command not found`
By the way, the package passed the check on GitHub Actions: https://github.com/wenjie1991/CellBarcode/actions/runs/13597209989
Thank you,
Wenjie
------------------------------------------
Wenjie SUN
Postdoctoral researcher
UMR168, Curie Institute
E-mail: wenjie.sun using curie.fr
Address: batiment Curie, RDC.13A
11 rue Pierre et Marie Curie, 75005 Paris
https://curie.fr/equipe/perie <https://institut-curie.org/personne/wenjie-sun>
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