[Bioc-devel] Deprecate hiAnnotator

[Nirav Malani]

Thanks Lori.

Yep, both packages can be deprecated.

Best,
Nirav Malani
On Jul 14, 2025 at 12:32 PM -0400, Kern, Lori <Lori.Shepherd using roswellpark.org>, wrote:
> Thank you for reaching out.  We can take care of the deprecation for you.
> Would you also like hiReadsProcessor deprecated as hiReadsProcessor depends on hiAnnotator and will not be able to build without it?  I notice you are also the maintainer of that package.
>
> Cheers
>
> Lori Shepherd - Kern
> Bioconductor Core Team
> Roswell Park Comprehensive Cancer Center
> Department of Biostatistics & Bioinformatics
> Elm & Carlton Streets
> Buffalo, New York 14263
> From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Nirav Malani <malnirav using gmail.com>
> Sent: Monday, July 14, 2025 12:28 PM
> To: bioc-devel using r-project.org <bioc-devel using r-project.org>
> Subject: [Bioc-devel] Deprecate hiAnnotator
>
> Hi,
>
> I am reaching out to discuss possibility to flag this package as “archived” or deprecated. I don’t have time to support this package anymore and don’t think there are any active users who will benefit from this software given other advanced package now available on BioC.
>
> Best,
> Nirav Malani
> On Jul 14, 2025 at 12:15 PM -0400, BBS-noreply using bioconductor.org, wrote:
> > [This is an automatically generated email. Please don't reply.]
> >
> > Hi hiAnnotator maintainer,
> >
> > According to the Multiple platform build/check report for BioC 3.22,
> > the hiAnnotator package has the following problem(s):
> >
> > o ERROR for 'R CMD build' on nebbiolo2. See the details here:
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> >
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