[Bioc-devel] Last day to make commits before Bioconductor RELEASE 3.20

[Kern, Lori]

Yes we would consider a TIMEOUT as broken as it would prevent the package from propagating and being available to end users.

If we know maintainers are actively trying to fix the issues and actively pushing to the git.biocondutor.org repo to try to remedy the situation,  we would be more lenient about immediate deprecation. But it should be fixed before the next release; if it does not build/check the entire cycle we would deprecate it before the 3.21 release happens.

Cheers,


Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Samuel Granjeaud IR/Inserm <samuel.granjeaud using inserm.fr>
Sent: Tuesday, October 29, 2024 9:37 AM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] Last day to make commits before Bioconductor RELEASE 3.20

Hi,

> Any package that remains broken in release would also be candidates for deprecation in 3.21
Is a package that reaches the timeout during buiding considered as broken?

I've changed segmentSeq to single core because there's a problem that
I've looked into but haven't yet been able to solve. As a result, the
vignette is taking much longer to build. My aim is to solve the problem
or switch to BiocParallel in January.

Best,
Samuel

_______________________________________________
Bioc-devel using r-project.org mailing list
https://secure-web.cisco.com/1V2GMpF3vfwIjPtFS0s6nMi0rmoz_F7ipS2Yq6HZSfID04GEh4hlGnaKxl4eN31IOt6K6cDCio9YkLLSa8tAr22AVo6bihxPXvPx0sLozN2eNLq1D-MFBUP8vPtCzSICUAf0sjtPFcpq0fmpKBcELuQJAifByYdahakJvqaQ1y23Ugjowb83gn6rYItQY4B15VEDf5pVqNDW7qvuqhU23UfEWonEqy-90tBAJueG2GzcCvYFpt0BGaNhDNAGdI-VvMMJyCKYxvkf3OPrM61MBcW1s72EcfyxjkxRC782FNKo7nNALVNxM-RdewqozKkGR/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel



This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.
	[[alternative HTML version deleted]]