[Bioc-devel] Policies regarding forked packages

[Leonardo Collado Torres]

Hi,

I'm not from Bioconductor core. Just a heads up that they've been busy
with the BioC 3.20 release that was just recently completed
https://bioconductor.org/news/bioc_3_20_release/.

>From the sideline, it seems that you are doing a great service to the
community by keeping your fork in working conditions. From
https://github.com/Bioconductor/Contributions/issues/new I don't see
any specific info about your question. Searching "fork" at
https://contributions.bioconductor.org/index.html also didn't lead me
to any relevant results.

Best,
Leo

Leonardo Collado Torres, Ph. D.
Investigator, LIEBER INSTITUTE for BRAIN DEVELOPMENT
Assistant Professor, Department of Biostatistics
Johns Hopkins Bloomberg School of Public Health
855 N. Wolfe St., Room 382
Baltimore, MD 21205
lcolladotor.github.io
lcolladotor using gmail.com

Leonardo Collado Torres, Ph. D.
Investigator, LIEBER INSTITUTE for BRAIN DEVELOPMENT
Assistant Professor, Department of Biostatistics
Johns Hopkins Bloomberg School of Public Health
855 N. Wolfe St., Room 382
Baltimore, MD 21205
lcolladotor.github.io
lcolladotor using gmail.com



On Mon, Oct 28, 2024 at 9:39 AM Ali Sajid Imami
<ali.sajid.imami using gmail.com> wrote:
>
> Hi,
>
> I have a question about your policies regarding forked packages. There is a package that some of our other packages depend on and is of interest to the Bioconductor community that our lab did not create. However, the package was never submitted to CRAN or BioConductor, and the original authors are not reachable. It has not been updated in over 7 years, and consequently, it does not build. It is, however, licensed under the MIT license. To ensure our build systems and analysis pipelines keep working, we forked this package a while back and have been maintaining that fork. What is the policy regarding submitting this package to Bioconductor? Our lab is well-versed in the package’s codebase, and we would be able to both maintain it indefinitely and be able to address any comments from the BioConductor community.
>
>
>
>
>
> ------------------------
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