[Bioc-devel] AnnotationHub: uniprot seqs ?

[Liu, Haibo]

We use Uniprot.ws to access the Uniprot data on demand: https://bioconductor.org/packages/release/bioc/html/UniProt.ws.html.

Haibo

-----Original Message-----
From: Bioc-devel <bioc-devel-bounces using r-project.org> On Behalf Of Vincent Carey
Sent: Tuesday, May 21, 2024 7:02 AM
To: aditya.bhagwat using uni-marburg.de
Cc: bioc-devel using r-project.org
Subject: Re: [Bioc-devel] AnnotationHub: uniprot seqs ?

On Tue, May 21, 2024 at 4:18 AM Aditya Bhagwat via Bioc-devel < bioc-devel using r-project.org> wrote:

> Hey guys,
>
> Do we have Uniprot sequences in AnnotationHub ?
>

That does not seem practical.

Please see
https://bioconductor.org/packages/release/bioc/vignettes/UniProt.ws/inst/doc/UniProt.ws.html

Let us know if that does not meet your need.


> Not being able to find them.
>



>
> Thankyouverymuch : )
>
> Aditya
>
> --
> Aditya Bhagwat
> Translational Proteomics ∙ Philipps-University Marburg Biological
> Pharmacological Center ∙ Room A406
> Tel.: +49 6421 28 27403
>
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