[Bioc-devel] about deprecate package DNABarcode

[Pedro Sánchez Sánchez]

Hi all,

I also tried to contact the author on the available email contacts (waiting
for response from tilo.buschmann.ac using gmail.com; depreciated email
tilo.buschmann using izi.fraunhofer.de) I found on the internet. If I get a
response, I'll let you know.

It will be a pity if DNABarcodes is depreciated for lacking of maintenance.

Just in case, it is helpful for someone, I just want to mention there is an
apparently similar repository on GitHub with the same goal as DNABarcodes,
by other developers and written in Python/Jupyter Notebooks:
https://github.com/feldman4/dna-barcodes.

Best,

Pedro

El mar, 12 mar 2024 a las 13:18, Kern, Lori via Bioc-devel (<
bioc-devel using r-project.org>) escribió:

> The package is deprecated in devel.  It will remain listed in the next
> Bioc 3.19 release, but deprecated, and removed from anticipated 3.20.  The
> package will have up until the fall release (generally late Oct / early
> Nov) to reinstate before it will be removed.
>
> Cheers,
>
>
> Lori Shepherd - Kern
>
> Bioconductor Core Team
>
> Roswell Park Comprehensive Cancer Center
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
>
> ________________________________
> From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Sun
> Wenjie <wenjie.sun using curie.fr>
> Sent: Tuesday, March 12, 2024 8:07 AM
> To: bioc-devel using r-project.org <bioc-devel using r-project.org>
> Subject: [Bioc-devel] about deprecate package DNABarcode
>
> Hi Bioconductor core team,
>
> I saw the package of DNABarcode is listed as to be deprecated.
>
> I am trying to reach the author. Do you know when will be the deadline?
>
> Best,
> Wenjie
>
> ------------------------------------------
> Wenjie SUN
> Postdoctoral researcher
> UMR168, Curie Institute
> E-mail: wenjie.sun using curie.fr
> Address: batiment Curie, RDC.13A
> 11 rue Pierre et Marie Curie, 75005 Paris
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