[Bioc-devel] Unable to install "spoon" package due to R version 4.4 dependence

[Kern, Lori]

mac can get R-devel at this location
https://mac.r-project.org/


Cheers


Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of James W. MacDonald <jmacdon using uw.edu>
Sent: Monday, March 11, 2024 2:55 PM
To: Kinnary Shah <kinnaryshahh using gmail.com>; bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] Unable to install "spoon" package due to R version 4.4 dependence

It depends on your OS. If you are on a Linux derivative not named macOS, you can get the sources here: https://secure-web.cisco.com/1VKCo1TIgcVvB_RkbMNJOfTtQs5LtXoTcvqqbNlDQOQCCvqL1JIsYw5M2rB4WHdCCjRkjQgUfxG2oNGX4bIpaOAEcJ2Id_tXwOK8GbXblf2-RbzebBQwCqlU3yIG0pWu6ek7HBmaWIZLSO4kBVJM08iaGLzsvSW3u5pesul5JadBzOi-fLN8GJivzOPB4qVTi6GK_31gSj8ymQOJRX0qIeriaufkcJrMz8nkTyKyDG4veE11jyY5uFbVOJwrTTrtG5bpOHS9DLWanCVxdSPS5yek2CtytbYHfXKEoWjuJMxRN5NtyjGHSjHXwPOj7PKKK/https%3A%2F%2Fcran.r-project.org%2Fsrc%2Fbase-prerelease%2F You want R-devel with the latest date. If you are on Windows, you can get the installer here https://secure-web.cisco.com/12QgdaFs2d324PR9Ms_FzbMPQo2wMXcrsIVg019uHNHke8C_M-HKR1IWZuKkAMMS7Dj9ccPhGvWsle7M3R4yJq_JqUbWQlrw6Pbazoup6q9p3nJcxYyXm5rZjZ4juvoWI0SwQHjJIRj4C7wVz7wsr0nHU3Nysg15aa10sYErFR-1cNl2kS0i8M8Ml0nydpz1bahTb6rApr-OaVIQwf3MFpXqPjrgFGZidzUgynpi69-9l29HQ8eKBNtwURu3THEq1ppw6xz0vXT9Mm8p1-l1ZmZoKx99_qL0AUx0SOd0KviDOHppl_zXCo8L04d_WwLv-/https%3A%2F%2Fcran.r-project.org%2Fbin%2Fwindows%2Fbase%2Frdevel.html If you are on macOS, presumably you can get R-devel, but I don't use a Mac so cannot help with that.

Best,

Jim



-----Original Message-----
From: Bioc-devel <bioc-devel-bounces using r-project.org> On Behalf Of Kinnary Shah
Sent: Monday, March 11, 2024 2:23 PM
To: bioc-devel using r-project.org
Subject: [Bioc-devel] Unable to install "spoon" package due to R version 4.4 dependence

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Dear BioC developers,

My package, "spoon", was successfully built last week. I was told in the review process to update the dependence of R to version 4.4. When I try to install the devel version of Bioconductor to test my package installation, it also requires R version 4.4. Based on the cran website, it says the latest release is R version 4.3.3. Is there a way to I proceed if I need a newer version of R that is not released yet?

Thanks,
Kinnary

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