[Bioc-devel] BiocCheck error

[Kern, Lori]

The mailing list check will only occur accurately on our system.

I believe this bug with BiocCheck is fixed in the current devel version 1.39.21 but will let the contributor that worked on the bug comment for sure.

Cheers,


Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of James W. MacDonald <jmacdon using uw.edu>
Sent: Thursday, January 25, 2024 9:06 AM
To: Marek Gierlinski (Staff) <M.Gierlinski using dundee.ac.uk>; bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] BiocCheck error

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-----Original Message-----
From: Bioc-devel <bioc-devel-bounces using r-project.org> On Behalf Of Marek Gierlinski (Staff)
Sent: Thursday, January 25, 2024 5:51 AM
To: bioc-devel using r-project.org
Subject: [Bioc-devel] BiocCheck error

When running BiocCheck::BiockCheck() on my package, it gets through almost everything and then produces an error:

...
* Checking for bioc-devel mailing list subscription...
    * NOTE: Cannot determine whether maintainer is subscribed to the Bioc-Devel mailing list (requires admin
      credentials). Subscribe here: https://secure-web.cisco.com/1PBt7Tc3WJqS1uVmeylyjdT8qmkOP7SJ_zzgyeGL8CquQF6eDI1bCdJBBVw8_qDxtemppEJ1bIX3uTK4gJd0YXvOywJi6qyewfVVRDk4DEFVrV8jCtznrbA0EQdYNISJHLzpurOTdlZkI2zBeE6ReLeR2lIPPXNMnP-9Q-GqW1t0rOAs0d3XWkxN2sjuPaeLfSsAA0HMOyQkfOvxdv-sqh9x6tgLpVQiJ4DXAOdcF1FzYKNx9BFXNwq_d4KNbak02LigDaXd1t_q8ELZqqov7-jjbVZoK_lDOOh95bDJjhV-s09dZVmcJRpVuoAoyi6xa/https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel__;!!K-Hz7m0Vt54!g8nTl4H3mS0txEb0EhOoiTBpinKkLxt0CndfgUZiq0NZmyclvGxWraoxus7i-EerExUjAEVpD-1753wCHT-xwd190w$
* Checking for support site registration...
    Maintainer is registered at support site.
Error in strsplit(content(response)$watched_tags, split = ",") :
  non-character argument

Is something wrong with my package (it passes Check with no issues)? Or is it a bug?

BiocCheck version 1.38.0, Bioconductor 3.18, R 4.3.2, MacOS 14.3.

Marek

The University of Dundee is a registered Scottish Charity, No: SC015096

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