[Bioc-devel] Question about cstack usage error
Johannes Griss
joh@nne@@gr|@@ @end|ng |rom medun|w|en@@c@@t
Tue Feb 27 08:36:27 CET 2024
Hi,
We've been encountering a cstack related error on the build systems on
random occasions
(https://master.bioconductor.org/checkResults/3.18/bioc-LATEST/ReactomeGSA/nebbiolo2-checksrc.html):
Error: C stack usage 7970308 is too close to the limit
I know, that the limit can be adapted using the "ulimit -s 16384"
command before starting the R session.
Unfortunately, in our case it seems to be caused by a call to the
gplots::heatmap.2 function.
Thanks a lot!
Kind regards,
Johannes
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