[Bioc-devel] Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`

[Kern, Lori]

Hello maintainers,

A little over a year ago, Bioconductor moved forward with a default branch renaming from 'master' to 'devel' on git.bioconductor.org.  For an easier transition we have thus far left the deprecated 'master' branch and if you were pushing received a Warning message that this branch was deprecated and to use 'devel'.  We are planning to officially defunct the use of 'master' shortly after the next Bioconductor release.  If you have been delaying the transition to using 'devel' we highly encourage you to check out the original documentation provided and make the transition as soon as possible. If you have any questions or concerns, please reach out on this mailing list or the dedicated community slack channel bioc-git.

Helpful resources:
1.  BiocBlog:https://blog.bioconductor.org/posts/2023-03-01-transition-to-devel/
2.  Branch Renaming FAQ:https://contributions.bioconductor.org/branch-rename-faqs.html


Cheers,


Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Kern, Lori <Lori.Shepherd using RoswellPark.org>
Sent: Wednesday, March 8, 2023 2:29 PM
To: Maria.Doyle <Maria.Doyle using ul.ie>; bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`

The Bioconductor Core Team has moved forward with the branch renaming from master to devel on git.bioconductor.org .

Please see

  1.  BiocBlog: https://secure-web.cisco.com/1viP5nUaE87rXaj1htxbn_Z4JxgvhbJAIp5weR1klW-gCBkH6ZNbpVsyXkW_l2i1dUWO75VXq8QQZawqX4VKORR-vqu_495UbK75DBJrFOSe3nOeXRltHOB5nv-r0XFX80L_gL9dQ1Uddqvmo0pQvOod5c45s870PTKQtzVlvAyF2ZMVWQZQjB9dgXH3j2W5RM4MUGxHcf9au36Jdl0_LZAzAbvQPikYlnRbQCqiDyBMUVINyKUxWZieZCpPgFIM3BzgcqcDPLluoVnUM0kUWFXTagxBIqZhqla1fRaZhIhFi8tCxtMy99hx9_8w3nYV5/https%3A%2F%2Fbioconductor.github.io%2Fbiocblog%2Fposts%2F2023-03-01-transition-to-devel%2F
  2.  Branch Renaming FAQ: https://secure-web.cisco.com/1arsDAuTSNTYHN7RN2VpvUx_3T1AN6xSyxddAqqhoglNQBa7DB1d1OBX_GXfzMyL2BBuz4al8m2_b5vIx9xEBq3tWC5-dC_hgKvbo3YrRofZQu3WeNulmit2X6pCN01Nl1QIBzyJ3wfdgEe9zu2cxYxvjTZ0Basya6zJOagcEocKJ3z0_xWoathpHFRdE6Awp6Tx2pygv632MK4Bc4j3bNN4Jhnqqk1wfkdY2yj4RB6LSq81gJtmituiVeuy8V6CVZ_tpdcJ28EiZW1-jW-MDBSkGnO-JV4c5O5QmKcI05FcSKpniaUonXYEh-TYi7ivL/https%3A%2F%2Fcontributions.bioconductor.org%2Fbranch-rename-faqs.html

Anyone having trouble can post to the community-bioc slack  #bioc_git channel  or on the bioc-devel using r-project.org mailing list

Cheers,


Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Maria.Doyle <Maria.Doyle using ul.ie>
Sent: Thursday, March 2, 2023 4:59 AM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: [Bioc-devel] Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`

On March 8th, the Bioconductor Core Team will rename the default branch on `git.bioconductor.org` to `devel`.


For more details, see the

1.    Blog post<https://secure-web.cisco.com/1ta96W8ZUhuu10ceOJOo87Qoj_ytrMT0LVK74QuN8DAtq4all0dy-yoq4LHmcsK-PWdiYUKLUT_m8VYssTTNNQOEABxHd_O__4Lz4TH7sbXXdhmnu17udkwugfPjk8z1t02YH9LQVbQk7ZbJuQYAngI1YJ2-Si3MV08RLA_f_5gwuoBucbsEfZzL8OisYYsp-Xo6FMFP-IfBDWSpqzKuLkV7RNYK9NT8bvnUjU3HxhHbFnI4CH0bxHEnT_N83yVbzN6-54djFcRZfO4MUBP2JxA6j8uStCyOaObZ1Q1kz76KeWHzxeQeQ07g6lS-4oktU/https%3A%2F%2Fbioconductor.github.io%2Fbiocblog%2Fposts%2F2023-03-01-transition-to-devel%2F>

2.    Branch Rename FAQ<https://secure-web.cisco.com/1DKLDGic1Z_Fg2Jx5m8jI_BAR2MahlZsmxbwgD7UQpRh6KPp0KMaq7ERr25z286K30X4pxIV6xUdyOLmvnWh-0YwmaokbxQlW-GOUpm_hrJeRP3Won4SQ6DHBT4fHz0K3ignOHvJVV2D4EKwqZvQ2WseYGXqvOsShtsnxE45ZomBP2xkt_nGKaVVnZmKPoBJSiNlYfyu_qo7okozalnqABEF2suYWrUCweZgEaV6Yv2emqZt99vAijvXnXRvBK3eD1zoKew5DLI36wS02WT-DX03sdr01uGwuZinzJ3pY9JmKTEQZp74zfVQDMHF94lZn/https%3A%2F%2Fcontributions.bioconductor.org%2Fbranch-rename-faqs.html>





Maria Doyle, PhD
Bioconductor Community Manager

School of Medicine,
University of Limerick, Limerick, V94 T9PX
[I work flexible hours across several time zones. I don't expect you to read or respond to my emails outside of your normal working hours]


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