[Bioc-devel] TCGAbiolinks fails

Tiago Chedraoui Silva t|@goch@t @end|ng |rom gm@||@com
Sat May 6 12:42:54 CEST 2023


Sorry for the late reply, I will fix the package this week.
I will also need to do a major change in the code since GDC legacy will be
shut down in the next months.

Best regards,
Tiago Chedraoui Silva

On Fri, Apr 28, 2023 at 10:04 AM Dario Strbenac via Bioc-devel <
bioc-devel using r-project.org> wrote:

> Good day,
> The package has checking errors which the developers of it need to fix
> themselves.
> Quitting from lines 114-121 (subtypes.Rmd)
> Error: processing vignette 'subtypes.Rmd' failed with diagnostics:
> object 'lgg.gbm.subtype' not found
> The installation error simply indicates that the package has never built
> successfully in Bioconductor 3.17.
> --------------------------------------
> Dario Strbenac
> University of Sydney
> Camperdown NSW 2050
> Australia
> _______________________________________________
> Bioc-devel using r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel

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