[Bioc-devel] Missing CHM13v2.0 TxDB and OrgDb objects

Christian Arnold chr@rno|d @end|ng |rom web@de
Sun Dec 10 18:06:22 CET 2023


Hello, I am working with the new human T2T-CHM13v2.0  assembly and while
a BSgenome package already exists
(BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0), I could not find the
corresponding TxDb and OrgDb packages. Is there any information when
they may also become available so it is easier to work with the new
genome for packages like ArchR, which support a custom genome but need
these standard annotation packages for their creation?


Thanks a lot for any information regarding this!

Best, Christian



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