[Bioc-devel] Fwd: philr problems reported in the Multiple platform build/check report for BioC 3.17

Justin Silverman j@||ve24 @end|ng |rom gm@||@com
Fri Apr 7 15:19:35 CEST 2023

Hello helpful list.

I have repeatedly got the following email over the past few weeks. At first I thought it was a false positive as the error in question was fixed a while back. But I keep receiving this email. I have asked a few colleagues to try to test out the package and run R CMD CHECK and they find that the package passes no without problems (particularly no one can recreate this bug in the vignette) on mac, windows, and linux.

I am sorry to ask this but could someone please help me figure out what is going on? I am almost certain that the master branch of my github repo (jsilve24/philr) is synced with the BioC 3.17 branch as they are both at version 1.25.2.

Thank you so much for your help and sorry for the trouble.


BBS-noreply using bioconductor.org writes:

> [This is an automatically generated email. Please don't reply.]
> Hi philr maintainer,
> According to the Multiple platform build/check report for BioC 3.17,
> the philr package has the following problem(s):
>   o ERROR for 'R CMD build' on nebbiolo1. See the details here:
>       <https://master.bioconductor.org/checkResults/3.17/bioc-LATEST/philr/nebbiolo1-buildsrc.html>
> Please take the time to address this by committing and pushing
> changes to your package at git.bioconductor.org
> Notes:
>   * This was the status of your package at the time this email was sent to you.
>     Given that the online report is updated daily (in normal conditions) you
>     could see something different when you visit the URL(s) above, especially if
>     you do so several days after you received this email.
>   * It is possible that the problems reported in this report are false positives,
>     either because another package (from CRAN or Bioconductor) breaks your
>     package (if yours depends on it) or because of a Build System problem.
>     If this is the case, then you can ignore this email.
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>     package and make sure that all the problems have gone.
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