[Bioc-devel] Turning an existing "software" package into a "data" package

[Geistlinger, Ludwig]

Thanks, Lori, I have updated the biocViews on the devel branch of the BioPlex package. Best, Ludwig
________________________________
From: Kern, Lori <Lori.Shepherd using RoswellPark.org>
Sent: Tuesday, July 12, 2022 10:44 AM
To: Geistlinger, Ludwig <Ludwig_Geistlinger using hms.harvard.edu>; bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: Re: Turning an existing "software" package into a "data" package

I have updated the package manifest files to move BioPlex from software to data experiment. Please update the biocViews in the description as soon as possible

Cheers,


Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Geistlinger, Ludwig <Ludwig_Geistlinger using hms.harvard.edu>
Sent: Tuesday, July 12, 2022 9:53 AM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: [Bioc-devel] Turning an existing "software" package into a "data" package

Hi Lori,

As I had indicated in personal communication, my BioPlex package https://secure-web.cisco.com/1M0Ol-q4grmap1gxOCeo1YCtQuJzCnpJgKoMmX1c8_2U6oHAC_e7dgcrdk78VJX8t5HMHJRC7VxldYKdR2pnTK15XZVqdIyKPWMc2uRRZbZzN68z6Z2FIKREC852xoe3xhY5TVjOsRAratuXkm0MX2sb246TpGnK-SP9EcE8LIUrJhDWVHqYXBOZomTgGkIQtM-Nffx_piMcMTZpJpmHuH_CV46RmfjdgaQQhPhI0yqSJo4G37UaZyRSMuPmUtsjrdYKno8AJH2SHfZf7toeINWXD_LvVuETGDaM9Dma9u3wsGxwqZSDXyxGdT8j3ZpBD/https%3A%2F%2Fbioconductor.org%2Fpackages%2FBioPlex<https://urldefense.proofpoint.com/v2/url?u=https-3A__secure-2Dweb.cisco.com_1M0Ol-2Dq4grmap1gxOCeo1YCtQuJzCnpJgKoMmX1c8-5F2U6oHAC-5Fe7dgcrdk78VJX8t5HMHJRC7VxldYKdR2pnTK15XZVqdIyKPWMc2uRRZbZzN68z6Z2FIKREC852xoe3xhY5TVjOsRAratuXkm0MX2sb246TpGnK-2DSP9EcE8LIUrJhDWVHqYXBOZomTgGkIQtM-2DNffx-5FpiMcMTZpJpmHuH-5FCV46RmfjdgaQQhPhI0yqSJo4G37UaZyRSMuPmUtsjrdYKno8AJH2SHfZf7toeINWXD-5FLvVuETGDaM9Dma9u3wsGxwqZSDXyxGdT8j3ZpBD_https-253A-252F-252Fbioconductor.org-252Fpackages-252FBioPlex&d=DwMFAg&c=WO-RGvefibhHBZq3fL85hQ&r=yPjzQ73-fmNXaJPV1gz9oHaqor6pHH3nhMisHpNHdtLiyt1ggXxpbN7zgyhVaqsX&m=2dDN0EuAqbkFtlT4a-etxnIejceIeDxGVMpzrMbSWX683aGwy8YAnjM-BNeMLCKN&s=qWU8AkYcQfCc30olCkiOeBCrsy0NCgUVQz5HrwqHWbk&e=> is currently listed as a software package, but it would actually be more appropriate to list it as an experiment data package. In addition, I would like to add ExperimentHub resources to the package. Is there a process for changing the classification of the package from "software" to "experiment data"?

I understood that I would need to update the biocViews of my package accordingly to include data package-specific views and ExperimentHub-specific views, is that something that I should do BEFORE or AFTER, the Bioc team internally changes which manifest the package is listed under?

Thanks & Best,
Ludwig


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