[Bioc-devel] SpatialExperiment checks fail on Windows platform

Dario Righelli dr|ghe||| @end|ng |rom gm@||@com
Mon Dec 12 11:11:20 CET 2022


Hi everyone,

we are having an issue when running GithubActions on Windows platform 
that we are not able to figure out.

The error is about loading an image as a grob during the vignette 
construction.
It seems that it loads the image path twice, but this sounds weird 
because the same vignette code is working on the other two platforms 
(linux and osx).

Does anyone have any ideas about this?

Here it is the reported check error:

Quitting from lines 110-111 (SpatialExperiment.Rmd) Error: processing 
vignette 'SpatialExperiment.Rmd' failed with diagnostics: Rscript.exe: 
UnableToOpenBlob 
`F:\biocbuild\bbs-3.17-bioc\tmpdir\RtmpsN0lzb\Rbuild3f6c3ae24a46\SpatialExperiment\vignettes\file:\F:\biocbuild\bbs-3.17-bioc\tmpdir\RtmpsN0lzb\Rinst3f6c113c6bc2\SpatialExperiment\extdata\10xVisium\section1\outs\spatial\tissue_lowres_image.png': 
Invalid argument @ error/blob.c/OpenBlob/2924 --- failed re-building 
'SpatialExperiment.Rmd'

Thanks, Dario

	[[alternative HTML version deleted]]



More information about the Bioc-devel mailing list