[Bioc-devel] RELEASE_3_14 branch freeze at 1pm EDT today.

[Kern, Lori]

The build report for today just finished.  The landing pages will be updated accordingly in the next few hours.

Cheers,


Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Brian Schilder <brian_schilder using alumni.brown.edu>
Sent: Monday, April 11, 2022 12:34 PM
To: Nitesh Turaga <nturaga.bioc using gmail.com>
Cc: Bioconductor Devel Mailing list <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] RELEASE_3_14 branch freeze at 1pm EDT today.

That�s odd!, especially since I was using the same link and looked at it just moments ago. I see the check results are indeed passing now. I wonder if this was something going on with Chrome caching an old version of the page? If so, apologies for the false alarm!

It does seem that the documentation page for orthogene on 3.14 isn�t showing the updates yet, but maybe that just takes some time. Same thing appears when using Safari, so I don�t think it�s a Chrome caching thing in this case.

-Brian



> On 11 Apr 2022, at 17:23, Nitesh Turaga <nturaga.bioc using gmail.com> wrote:
>
> Hi Brian,
>
> These are the commits we see. https://secure-web.cisco.com/10sztQfOj6Ri34L-ktjqSuemFt2DjxWfxov90k9jsD3HRFg7S5dsg7JmayS5XNjBTbLUVCiWejzGbtqZmTg7jZTPWPoRHiPCyeK8RdZCSPfLq3gKO06XBFLy_1hHcixxstS5J05_h6TQEuM_pn3SOYv9FT7tlV5Ouk6e6BZpa1R5mfDzehnUcz9m_9o-BE7D3X8emI57-Kus7oh6NplLAXfdtE_8SO78Vi7SA7-EJEX2qVhAqIZhwBstLbEsoJbCbhl8ngfWkysefk_sqwQeQskzcZZDnM4vEaLx3GEe8g341nAMtYufeh4I80fflP1ml/https%3A%2F%2Fbioconductor.org%2FcheckResults%2Frelease%2Fbioc-LATEST%2Forthogene%2F It seems to be building fine, where does it say Oct 2021? I can�t seem to find it.
>
> orthogene 1.0.2  (landing page)
> Snapshot Date: 2022-04-10 01:55:06 -0400 (Sun, 10 Apr 2022)
> git_url: https://secure-web.cisco.com/1NSelIXLJarUCa_inF-FbfaYlU-m0UELigiQDiftXZs3e0Hz32jULbN9HdbrVCdY38veQVTzPcpXuKsO1OkNGDjnltAhtEBwzaDA9FuZYmBMrjE9LzPjDYR9JA7e96hVtgc42_2b2tmSNlUqVuLSAW3wxqqAZcLgDJ6j1sNDehSY_XnoiVx84h5FIK6xt6oaWzZH9_yeapZ0bk5o43Gpq0ILhqs2frSJH8GYllwyPRmYJRBeFi5hcpEimOEvxZ9qoi2fB9f2_uc8X5Di8xSG6o17gNiR6mK_0uRv5exbzXfg6PWIn0lJWuX7IFQLBKBCz/https%3A%2F%2Fgit.bioconductor.org%2Fpackages%2Forthogene
> git_branch: RELEASE_3_14
> git_last_commit: be43cf5
> git_last_commit_date: 2022-04-08 07:13:46 -0400 (Fri, 08 Apr 2022)
>
>
> commit 8354ef81f4fe68acac346fb0ab349e41204154a7 (HEAD -> master, origin/master, origin/HEAD)
> Author: bschilder <brian_schilder using alumni.brown.edu>
> Date:   Fri Apr 8 12:06:34 2022 +0100
>
>    update readme [skip ci]
>
> commit d1b3a2a5f0d74e02132ff695415013f0b9635eef
> Author: bschilder <brian_schilder using alumni.brown.edu>
> Date:   Fri Apr 8 12:00:46 2022 +0100
>
>    Increase test coverage
>
>
> Best,
>
> Nitesh
>
>
> Nitesh Turaga
> Scientist II, Department of Data Science,
> Bioconductor Core Team Member
> Dana Farber Cancer Institute
>
>> On Apr 11, 2022, at 12:19 PM, Brian Schilder <brian_schilder using alumni.brown.edu> wrote:
>>
>> Hi Nitesh,
>>
>> I pushed a number of fixes to orthogene on Bioc 3.14 over the last couple weeks, most recently last Friday (April 10th). But the VM report is saying my last commit was October 2021, which was v1.0.0 when it should be v1.0.2 now. As a consequence orthogene is not passing checks. Do you know what might be going on here? I didn�t encounter any errors or warnings when I made the upstream pushes.
>>
>> Best,
>> Brian
>>
>>> On 11 Apr 2022, at 17:00, Nitesh Turaga <nturaga.bioc using gmail.com> wrote:
>>>
>>> Dear Maintainers,
>>>
>>> Please keep in mind that we are on schedule for our release as given in http://secure-web.cisco.com/1gHTK3d2SmugXjM-fl1jC1iq_wl5EMTGd4mP2y4VJLmrrQtRX04U9W540Ek8kDnbh_awI23GTky6x2cnqlikuHCYy5NvYzPFfN31AqaLVz99riEmABMiBEzAapFBqfGPthESByG9QiLudxwDOmOh-zP__sIyzvC66XXthU4L3f6aqvwH-t6G8wRSSQrblZCHuo37UzuGSVAQyKVc6IcwfC2rGNFnUMMtCc1wMOnoq4H4SHV8rFGpTSMD2fnqJMqhtqb1QahcawU9QodJ871-fvdtJaYw4YZk9XVbNQaBW8XDZ7gbwwL0FVIgpyZgv5SvJ/http%3A%2F%2Fbioconductor.org%2Fdevelopers%2Frelease-schedule%2F
>>>
>>> Today (April 11th 2022) at 1pm EDT, I will freeze the commits to the RELEASE_3_14 branch in Bioconductor. This is for all packages (software, data-experiment and workflow).
>>>
>>> After 1pm today, you will not be able to push to the RELEASE_3_14 branch. I will send an email post freeze as well.
>>>
>>> Best regards,
>>>
>>> Nitesh
>>>
>>>
>>> Nitesh Turaga
>>> Scientist II, Department of Data Science,
>>> Bioconductor Core Team Member
>>> Dana Farber Cancer Institute
>>>
>>> _______________________________________________
>>> Bioc-devel using r-project.org mailing list
>>> https://secure-web.cisco.com/1MiIzgRxYyMucOF9njSdZIdEiTRjJ9Bcx1MkvYUSLFxxHT0oHhpm7r51gGJ3dIukxPB6Cr1tI5q4-C4XL_6Cq8OPSei2bI-VQ9RfMqxZpYjg1wEGRElYfNM5pBoczsalnW37pw-7ohuXQ-ZFj6OsnAv-j4C6_AiSey1PRdv2fXCZowAk7Ewf8tQGVPksv97B1UXwxS9tZo1SPvA37KR3BccG7v8qXZR87mMVEvJdC2Wxxy4OUVn1oWJw0P2AKpsQlrY5reQHMj6kzye9yeQ88Zd1Tucpj7BtzSMcORK9dv5kFIEvZiXAKWEVE1pcCPj9w/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel
>>
>

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