[Bioc-devel] Bioconductor Release 3.14 Code Freeze

Sat Apr 9 01:16:24 CEST 2022

Dear the managers,

I appreciate your quick response and I understand it.
Many thanks for your support.

-- 
Keita Iida, PhD
Email 1: kiida using protein.osaka-u.ac.jp
Email 2: kiida1984 using med.tohoku.ac.jp
Email 3: kiida1984 using gmail.com
Tel: (+81) 6-6879-8618 (ext. 8618)
Fax: (+81) 6-6879-8619
Institute for Protein Research, Osaka University
Room612, 3-2 Yamadaoka, Suita, Osaka, 565-0871, JAPAN

> On Apr 9, 2022, at 8:12, Kern, Lori <Lori.Shepherd using RoswellPark.org> wrote:
> 
> Your recently accepted package was accepted to the development branch of Bioconductor not release 3.14.
> It should be available in Bioc devel and will be in the upcoming Bioconductor 3.15 release happening later this month. 
> 
> Get Outlook for iOS <https://aka.ms/o0ukef>
> From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Keita Iida <kiida using protein.osaka-u.ac.jp>
> Sent: Friday, April 8, 2022 7:02:22 PM
> To: bioc-devel using r-project.org <bioc-devel using r-project.org>
> Subject: Re: [Bioc-devel] Bioconductor Release 3.14 Code Freeze
>  
> Dear the managers
> Bioconductor,
> 
> I have a quick question on RELEASE_3_14.
> 
> Our R package ASURAT (past Issue #2524) was accepted on 5th April, 2022.
>   https://secure-web.cisco.com/13r11GItKoJlCdmF9j7t4VI-VVy3OX_Fqp2O5gnnapiQ9AsdQ7Qm0_BfObz6Uhp0tQGmD_7OG35lEgf0IQawuBlapj3Nif1bjRZmowqOnu3GMubhG3RL4VZipOOF_iWiLhMeIkYed90tlVMEV-SE10YUm913jaSfnKADNnv6tYw1du3CVld23NQydsYBQwQL8tvrzYFSH5A9tAoyfHxe8b6s-RAHjb3Z9RlnKt7Q_s_cVNBIk1KfuP3ors0_ZEc_ciVjFRlVWaMxKjwQOzxbpNXkAGNhfZW_LL4Uu08lwcHFH_TyfVhYZ1Av8kiXbWFud/https%3A%2F%2Fbioconductor.org%2Fpackages%2Fdevel%2Fbioc%2Fhtml%2FASURAT.html <https://secure-web.cisco.com/13r11GItKoJlCdmF9j7t4VI-VVy3OX_Fqp2O5gnnapiQ9AsdQ7Qm0_BfObz6Uhp0tQGmD_7OG35lEgf0IQawuBlapj3Nif1bjRZmowqOnu3GMubhG3RL4VZipOOF_iWiLhMeIkYed90tlVMEV-SE10YUm913jaSfnKADNnv6tYw1du3CVld23NQydsYBQwQL8tvrzYFSH5A9tAoyfHxe8b6s-RAHjb3Z9RlnKt7Q_s_cVNBIk1KfuP3ors0_ZEc_ciVjFRlVWaMxKjwQOzxbpNXkAGNhfZW_LL4Uu08lwcHFH_TyfVhYZ1Av8kiXbWFud/https%3A%2F%2Fbioconductor.org%2Fpackages%2Fdevel%2Fbioc%2Fhtml%2FASURAT.html>
> My GitHub account already has ssh public keys.
> 
> Since ASURAT is not included in the list of Software Builds, I would like you to recheck ASURAT’s status.
> I am sorry if I misunderstand the concept of RELEASE.
> 
> Sincerely yours,
> Keita Iida
> 
> -- 
> Keita Iida, PhD
> Email 1: kiida using protein.osaka-u.ac.jp
> Email 2: kiida1984 using med.tohoku.ac.jp
> Email 3: kiida1984 using gmail.com
> Tel: (+81) 6-6879-8618 (ext. 8618)
> Fax: (+81) 6-6879-8619
> Institute for Protein Research, Osaka University
> Room612, 3-2 Yamadaoka, Suita, Osaka, 565-0871, JAPAN
> 
> > On Apr 9, 2022, at 2:49, Kern, Lori <Lori.Shepherd using RoswellPark.org> wrote:
> > 
> > The Code Freeze for the current Bioconductor 3.14 Release is next Monday April 11, 2022.  After this date there will be no changes to the code on this branch; this includes bug fixes or hot fixes.  If your package is failing on the release build report,  this weekend will be your last chance ever to update the code on RELEASE_3_14 branch of Bioconductor.
> > 
> > Software Builds:  http://secure-web.cisco.com/1E9tqFB-dCQpVCR_hrqG1nSqZOdnnsV4dfU7v1q6xmP4xvVFHdVo5Tg_aWyeKO4_4P4JGk44Hj5g7YoZ3YP4PF59F9QE-2aRostyrdlZN6nTuS8jui-pJNS5-TfE26r_mKC0jzn1v4MD_rH9XqS8a70vjbENH47qkLhVAQgV0nwK_AsEWY8GU1766Yu0GinyUOIpyJQYksRIR06OU_JQQqEB0DrmZV49vkE-G3s3Kt0fxAgAMxgWqi1lxOAAQVO4YYI4wiizsIq1BUtTCgm5lEOUBaiEYJiW5vZtJVAaX8Tncmr9AnQw7iVtG-h2iTi55/http%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.14%2Fbioc-LATEST%2F <http://secure-web.cisco.com/1E9tqFB-dCQpVCR_hrqG1nSqZOdnnsV4dfU7v1q6xmP4xvVFHdVo5Tg_aWyeKO4_4P4JGk44Hj5g7YoZ3YP4PF59F9QE-2aRostyrdlZN6nTuS8jui-pJNS5-TfE26r_mKC0jzn1v4MD_rH9XqS8a70vjbENH47qkLhVAQgV0nwK_AsEWY8GU1766Yu0GinyUOIpyJQYksRIR06OU_JQQqEB0DrmZV49vkE-G3s3Kt0fxAgAMxgWqi1lxOAAQVO4YYI4wiizsIq1BUtTCgm5lEOUBaiEYJiW5vZtJVAaX8Tncmr9AnQw7iVtG-h2iTi55/http%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.14%2Fbioc-LATEST%2F>
> > Experiment Data Builds: http://secure-web.cisco.com/1NUXdqoYjXX7PpwKF852La3S1maV5Rgrr4QaoHskx3PO9T-bI--bPHFrVFfy177lS1Uy1YRIeOdBGlegvf7Tz0c1hk80yHYvf-S0siVffftfHHmHyqiK2J2H66jmUMqHVclY8cWKGzN4qstUKUNTOnZdmcPZS7zxm9_s2ndtxUEa_erklS7lycUlvAiIr2IVHMLcCjnJEv83SiM2oSEAtdOLe9BiQsjEhZ-osGBmC5RcYbBcMigNcSN1pCLEYWVI-m6Zj69EEwoqAQgd415rmItQ7CtSJtZz6qPiX4g4tdP7MXcvhrMLDcJLKgLFOrzse/http%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.14%2Fdata-experiment-LATEST%2F <http://secure-web.cisco.com/1NUXdqoYjXX7PpwKF852La3S1maV5Rgrr4QaoHskx3PO9T-bI--bPHFrVFfy177lS1Uy1YRIeOdBGlegvf7Tz0c1hk80yHYvf-S0siVffftfHHmHyqiK2J2H66jmUMqHVclY8cWKGzN4qstUKUNTOnZdmcPZS7zxm9_s2ndtxUEa_erklS7lycUlvAiIr2IVHMLcCjnJEv83SiM2oSEAtdOLe9BiQsjEhZ-osGBmC5RcYbBcMigNcSN1pCLEYWVI-m6Zj69EEwoqAQgd415rmItQ7CtSJtZz6qPiX4g4tdP7MXcvhrMLDcJLKgLFOrzse/http%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.14%2Fdata-experiment-LATEST%2F>
> > Workflow Builds: http://secure-web.cisco.com/1BrpQH9_SJuhnT0qBTAaVlGpNrpsVn5e3eaRYBNYJMA41dMJ_yU6ctkhwNWZGVrP0-5Ol38x3LA_npDybQFUf4-4mS21_UnXe8zIxjS7xqIKyCNddebm8USPlDLMJiC8UT0AwOlxlZtzdcL60XrAV695dofGIlBdbXfa4OHbze-w3S7mac-z6EEMNlQb5-05u1DiS0HieTzyWatONMQBeM5VgPzK2e_5gZC9HLMiuyRoiZ4ABqsf7IEG9COU4ULeZXDQCWelwVHDNuX3p31KkzvY7b0rTKiZe5R1_Dl32fMbicJ6zj587hBCA0WVHJ7mI/http%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.14%2Fworkflows-LATEST%2F <http://secure-web.cisco.com/1BrpQH9_SJuhnT0qBTAaVlGpNrpsVn5e3eaRYBNYJMA41dMJ_yU6ctkhwNWZGVrP0-5Ol38x3LA_npDybQFUf4-4mS21_UnXe8zIxjS7xqIKyCNddebm8USPlDLMJiC8UT0AwOlxlZtzdcL60XrAV695dofGIlBdbXfa4OHbze-w3S7mac-z6EEMNlQb5-05u1DiS0HieTzyWatONMQBeM5VgPzK2e_5gZC9HLMiuyRoiZ4ABqsf7IEG9COU4ULeZXDQCWelwVHDNuX3p31KkzvY7b0rTKiZe5R1_Dl32fMbicJ6zj587hBCA0WVHJ7mI/http%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.14%2Fworkflows-LATEST%2F>
> > 
> > We appreciate everyones' continued contributions to Bioconductor.
> > 
> > For clarification: Everyone can still commit changes to the devel (master branch) for the upcoming Bioconductor 3.15 release. This freeze only applies to the RELEASE_3_14 branch.  We ask that changes on the devel branch are limited to ERROR correction only; no API or major changes to packages as of next Wednesday.  The master branch is now consider the release candidate branch for release 3.15.
> > 
> > 
> > Cheers,
> > 
> > 
> > Lori Shepherd - Kern
> > 
> > Bioconductor Core Team
> > 
> > Roswell Park Comprehensive Cancer Center
> > 
> > Department of Biostatistics & Bioinformatics
> > 
> > Elm & Carlton Streets
> > 
> > Buffalo, New York 14263
> > 
> > 
> > This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.
> >        [[alternative HTML version deleted]]
> > 
> > _______________________________________________
> > Bioc-devel using r-project.org mailing list
> > https://secure-web.cisco.com/1GnTDIjwEIZVUlgXR2jvvCt98dRl3uZuLoGfkWPEA61dBqIxe9VFZXLU9Pfdx6tCqvbeGJQOpLWtl_XRY55A4OU0WQULcNc3PK538_7mcc_QBwbxa3wY-cF7CX6hoE37y6WbURypKxKlW7-BdJ0BbXM6QHbtTi9ckIy1IwS56iv4WPybcV4BEkSCJ0UpCRWnLn2uY_zQoA53Zcprz6MLYnV98WCzRiovYw7hOPcp0dFzt-4gbmmvaqlZ-6Gcjb6KeTr1g-84FAB8Q1uMYeq8UvU0wjYpqyI0Y40DD6R_npg7MozCyIcdoRS7ISWaKk1Bq/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel <https://secure-web.cisco.com/1GnTDIjwEIZVUlgXR2jvvCt98dRl3uZuLoGfkWPEA61dBqIxe9VFZXLU9Pfdx6tCqvbeGJQOpLWtl_XRY55A4OU0WQULcNc3PK538_7mcc_QBwbxa3wY-cF7CX6hoE37y6WbURypKxKlW7-BdJ0BbXM6QHbtTi9ckIy1IwS56iv4WPybcV4BEkSCJ0UpCRWnLn2uY_zQoA53Zcprz6MLYnV98WCzRiovYw7hOPcp0dFzt-4gbmmvaqlZ-6Gcjb6KeTr1g-84FAB8Q1uMYeq8UvU0wjYpqyI0Y40DD6R_npg7MozCyIcdoRS7ISWaKk1Bq/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel>
> 
> _______________________________________________
> Bioc-devel using r-project.org mailing list
> https://secure-web.cisco.com/1GnTDIjwEIZVUlgXR2jvvCt98dRl3uZuLoGfkWPEA61dBqIxe9VFZXLU9Pfdx6tCqvbeGJQOpLWtl_XRY55A4OU0WQULcNc3PK538_7mcc_QBwbxa3wY-cF7CX6hoE37y6WbURypKxKlW7-BdJ0BbXM6QHbtTi9ckIy1IwS56iv4WPybcV4BEkSCJ0UpCRWnLn2uY_zQoA53Zcprz6MLYnV98WCzRiovYw7hOPcp0dFzt-4gbmmvaqlZ-6Gcjb6KeTr1g-84FAB8Q1uMYeq8UvU0wjYpqyI0Y40DD6R_npg7MozCyIcdoRS7ISWaKk1Bq/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel <https://secure-web.cisco.com/1GnTDIjwEIZVUlgXR2jvvCt98dRl3uZuLoGfkWPEA61dBqIxe9VFZXLU9Pfdx6tCqvbeGJQOpLWtl_XRY55A4OU0WQULcNc3PK538_7mcc_QBwbxa3wY-cF7CX6hoE37y6WbURypKxKlW7-BdJ0BbXM6QHbtTi9ckIy1IwS56iv4WPybcV4BEkSCJ0UpCRWnLn2uY_zQoA53Zcprz6MLYnV98WCzRiovYw7hOPcp0dFzt-4gbmmvaqlZ-6Gcjb6KeTr1g-84FAB8Q1uMYeq8UvU0wjYpqyI0Y40DD6R_npg7MozCyIcdoRS7ISWaKk1Bq/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel>
> 
> 
> This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.

	[[alternative HTML version deleted]]