[Bioc-devel] Bioconductor 3.14 db0s, OrgDbs and TxDbs now available

Kern, Lori Lor|@Shepherd @end|ng |rom Ro@we||P@rk@org
Fri Sep 24 16:26:14 CEST 2021


Hello Bioconductor Community!

The newest db0s, OrgDbs, and TxDbs annotation packages for the upcoming
Bioconductor 3.14 release are up and available for download in the devel version
of Bioconductor.

The deadline for submitting contributed annotations will be Wednesday October 20th.

The new db0 packages are:

anopheles.db0_3.14.0.tar.gz
arabidopsis.db0_3.14.0.tar.gz
bovine.db0_3.14.0.tar.gz
canine.db0_3.14.0.tar.gz
chicken.db0_3.14.0.tar.gz
chimp.db0_3.14.0.tar.gz
ecoliK12.db0_3.14.0.tar.gz
ecoliSakai.db0_3.14.0.tar.gz
fly.db0_3.14.0.tar.gz
human.db0_3.14.0.tar.gz
malaria.db0_3.14.0.tar.gz
mouse.db0_3.14.0.tar.gz
pig.db0_3.14.0.tar.gz
rat.db0_3.14.0.tar.gz
rhesus.db0_3.14.0.tar.gz
worm.db0_3.14.0.tar.gz
xenopus.db0_3.14.0.tar.gz
yeast.db0_3.14.0.tar.gz
zebrafish.db0_3.14.0.tar.gz

The new OrgDb packages are:

GO.db_3.14.0.tar.gz
Orthology.eg.db_3.14.0.tar.gz
PFAM.db_3.14.0.tar.gz
org.Ag.eg.db_3.14.0.tar.gz
org.At.tair.db_3.14.0.tar.gz
org.Bt.eg.db_3.14.0.tar.gz
org.Ce.eg.db_3.14.0.tar.gz
org.Cf.eg.db_3.14.0.tar.gz
org.Dm.eg.db_3.14.0.tar.gz
org.Dr.eg.db_3.14.0.tar.gz
org.EcK12.eg.db_3.14.0.tar.gz
org.EcSakai.eg.db_3.14.0.tar.gz
org.Gg.eg.db_3.14.0.tar.gz
org.Hs.eg.db_3.14.0.tar.gz
org.Mm.eg.db_3.14.0.tar.gz
org.Mmu.eg.db_3.14.0.tar.gz
org.Pf.plasmo.db_3.14.0.tar.gz
org.Pt.eg.db_3.14.0.tar.gz
org.Rn.eg.db_3.14.0.tar.gz
org.Sc.sgd.db_3.14.0.tar.gz
org.Ss.eg.db_3.14.0.tar.gz
org.Xl.eg.db_3.14.0.tar.gz


The new TxDb packages are:

TxDb.Cfamiliaris.UCSC.canFam4.refGene_3.14.0.tar.gz
TxDb.Cfamiliaris.UCSC.canFam5.refGene_3.14.0.tar.gz
TxDb.Mmulatta.UCSC.rheMac10.refGene_3.14.0.tar.gz
TxDb.Rnorvegicus.UCSC.rn7.refGene_3.14.0.tar.gz


Thank you.



Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263


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