[Bioc-devel] Spurious "dims [product 864] do not match the length of object [432]" on macOS

Neumann, Steffen @neum@nn @end|ng |rom |pb-h@||e@de
Fri Sep 24 09:21:36 CEST 2021


Hi,

for several years xcms is suffering from absolutely spurious 
issues on macOS.

There is no pattern regarding release/devel, R versions, different
macOS machines like merida1 in 2019, to machv2 today and a few
occurances inbetween. The tssue usually resolves itself after a few
days without any code change. 

Interestingly, 864=432*2, so something is duplicated somewhere. Also,
today was the first time I saw BiocParallel mentioned near the error,
see below. 

=> Has anyone observed such a domension mismatch, maybe in other
packages, and has any idea what could be the (spurious) cause ?

Yours,
Steffen
 

Quitting from lines 149-152 (xcms-lcms-ms.Rmd) 
Error: processing vignette 'xcms-lcms-ms.Rmd' failed with diagnostics:
BiocParallel errors
  element index: 1
  first error: BiocParallel errors
  element index: 1
  first error: dims [product 864] do not match the length of object
[432]






https://github.com/sneumann/xcms/issues/422


-- 

Upcoming events:
* Save-the-date: 22.-24.11.2021 3rd metaRbolomics Hackathon, Wittenberg
(Germany)
  
https://www.denbi.de/training/1177-3rd-de-nbi-elixir-de-metarbolomics-hackathon

---
IPB Halle                    Bioinformatics and Scientific Data
Dr. Steffen Neumann          http://www.IPB-Halle.DE
Weinberg 3                   Tel. +49 (0) 345 5582 - 1470
06120 Halle                       +49 (0) 345 5582 - 0
sneumann(at)IPB-Halle.DE     Fax. +49 (0) 345 5582 - 1409


More information about the Bioc-devel mailing list