[Bioc-devel] Issues with package size

[Kern, Lori]

We don't encourage hosting a vignette someplace else as then the code is not automatically checked.  Is the large size do to data or images?  Could you provide some additional detail please?


Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Zuguang Gu <jokergoo using gmail.com>
Sent: Thursday, September 23, 2021 8:45 AM
To: Giulia Pais <giuliapais1 using gmail.com>
Cc: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] Issues with package size

Hi Giulia,

I think it is ok to host the vignettes somewhere else. I have two packages
of which the vignettes are hosted on GitHub Page.

http://www.bioconductor.org/packages/devel/bioc/html/ComplexHeatmap.html
https://www.bioconductor.org/packages/devel/bioc/html/cola.html

But since now the vignettes are not automatically checked, you need to make
sure every time you update your package, the vignettes can be successfully
generated.

Cheers,
Zuguang


On Thu, 23 Sept 2021 at 14:07, Giulia Pais <giuliapais1 using gmail.com> wrote:

> Hello, I�m the developer of the package ISAnalytics.
> I�d like to ask if it is possible to have a file/vignette that links to
> other documentation outside the package (like a GitHub wiki) since we have
> issues with the maximum allowed package size due to vignette size, We would
> like to maintain as much documentation as possible and we already tried to
> reduce data included but it�s not sufficient.
> Thanks in advance
> Giulia Pais
>
>
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