[Bioc-devel] EXTERNAL: Bioconductor build system using old commit

[Marcel Ramos]

Hi Eric,

This is the devel build report and it includes a commit from Mon Aug 16:
https://bioconductor.org/checkResults/devel/bioc-LATEST/slinky/ 
<https://bioconductor.org/checkResults/devel/bioc-LATEST/slinky/>

If you need to patch the release version as well, follow the guide that 
Jim kindly posted:
http://bioconductor.org/developers/how-to/git/bug-fix-in-release-and-devel/ 
<http://bioconductor.org/developers/how-to/git/bug-fix-in-release-and-devel/>

Best regards,

Marcel

On 9/17/21 2:14 PM, Kort, Eric wrote:
> Good day. I have made updates to my package, slinky. I pushed my changes both to my github rep, and the Bioconductor git repository.
>
> My remotes are set up as follows:
>
>> git remote -v
> origin     https://github.com/vanandelinstitute/slinky (fetch)
> origin     https://github.com/vanandelinstitute/slinky (push)
> upstream             git using git.bioconductor.org:packages/slinky.git (fetch)
> upstream             git using git.bioconductor.org:packages/slinky.git (push)
>
> Following directions here: https://bioconductor.org/developers/how-to/git/maintain-github-bioc/
>
> I then did
>
> git fetch upstream
> git merge upstream/master
> git push origin master
>
> But on the build system (https://bioconductor.org/checkResults/3.13/bioc-LATEST/) where errors are being encountered, the git_last_commit shows an old commit and commit date.
>
> Do I have the wrong remote? Or is there another mistake I am making?
>
> -Eric
>
>
>
>
> 	[[alternative HTML version deleted]]
>
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---
Marcel Ramos
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Dept. of Biostatistics & Bioinformatics
Elm St. & Carlton St.
Buffalo, New York 14263



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