[Bioc-devel] EXTERNAL: [BULK] genefu Warning

[Marcel Ramos]

Hi Christopher,

It would be a good idea to remove the `LazyData: yes` from the DESCRIPTION.

https://bioconductor.org/developers/package-guidelines/#description 
<https://bioconductor.org/developers/package-guidelines/#description>

One that is set make sure there is no pollution in function environments 
e.g., `sbt.model=scmod1.robust`
in `R/genius.R`. Create an empty data environment where you can load 
package data for the
function to use with `new.env(parent = emptyenv())`.


Best,

Marcel

On 5/18/21 6:21 PM, Eeles, Christopher wrote:
> Hello Bioc Core Team,
>
> I just noticed that one of our lab package, genefu, has a WARNING on devel for all build machines.
>
> The warning is:
>
> LazyData DB of 5.0 MB without LazyDataCompression set
>    See �1.1.6 of 'Writing R Extensions'
>
> I wanted to make sure that this will not affect the inclusion of genefu in the 3.13 release.
>
> I have already started researching the issue and will push a fix as soon as the release is complete on Thursday.
>
> ---
> Christopher Eeles
> Software Developer
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---
Marcel Ramos
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Dept. of Biostatistics & Bioinformatics
Elm St. & Carlton St.
Buffalo, New York 14263



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