[Bioc-devel] AnnotationHub Corrupt Cache

Kern, Lori Lor|@Shepherd @end|ng |rom Ro@we||P@rk@org
Fri May 14 13:59:09 CEST 2021


Thank you for the report.  We updated R earlier in the week and flushed the cache's. This resulted in this unexpected error. We have remedied the issue on the builders and it should not appear on today's report. If it occurs again I will investigate further.

Cheers,


Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Jeroen Gilis <Jeroen.Gilis using UGent.be>
Sent: Friday, May 14, 2021 7:48 AM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: [Bioc-devel] AnnotationHub Corrupt Cache

Hello bioc-devel community,

Since the last bioc build, my package satuRn gets a build error on linux only.
The build error is propagated through AnnotatioHub, with error "Error: Corrupt Cache: resource path"
https://secure-web.cisco.com/1NaX_Ex5p9sJ9fHPMI2cwtEsr6DG4r5GkJJYc3ADNzzGuN1uKpo3utBXGr9BBUFHryQu5wRUdrPzA1NSzZH446bEiTJQA-epVOfmlV3yzPQ_tL9wmMObdofCQ6OyXMHbeWFO0iPHqhzT1qmKWW0b_lMTCEFNElIT1BzfCFOoYAz8y54SkUbQlu_Q5ufIbmVYF2KaENk3X9HKA-s9d9jSvXd-9EupqqvKPES_CUF0eEzCaSDreFnRjIosFiX7Dcl__Zc-yt8LSCd1EpFQ1HQEZsRgcbGKoYXBU8UrSk5FhzAP87-VyCpYndciGz17geMGm/https%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.13%2Fbioc-LATEST%2FsatuRn%2Fnebbiolo1-buildsrc.html

Given that the error did not occur prior to yesterday and it only occurs on the linux build, is this something I should/can act on? Normally I would give it a few other build rounds to report it but given the build deadline I am a bit more worried.

Kind regards,
Jeroen

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