[Bioc-devel] bioconductor_docker:devel missing MAE and GenomeInfoDb

Nitesh Turaga ntur@g@@b|oc @end|ng |rom gm@||@com
Wed Mar 10 15:11:28 CET 2021

Hi Laurent,

Since you are using the devel version of `bioconductor_docker` it's possible that the packages failed to build on the build system. 

For example, http://bioconductor.org/checkResults/devel/bioc-LATEST/MultiAssayExperiment/ , MultiAsssayExperiment failed to build on devel. A better solution for this, is to use the release 3.12 version of 'bioconductor_docker:RELEASE_3_12'. 

This may be transient, and could be fixed by the maintainers.



On 3/9/21, 4:51 PM, "Bioc-devel on behalf of Laurent Gatto" <bioc-devel-bounces using r-project.org on behalf of laurent.gatto using uclouvain.be> wrote:

    I am setting up a repo/docker for the coming Bioc2021 workshops, and apparently packages ‘GenomeInfoDb’, ‘MultiAssayExperiment’ are not available for this version of R [1] (they indeed fail on devel).  Surprisingly, they seemed to be available earlier in the day - my action failed for a different reason, much later in the process.


    [1] https://github.com/lgatto/QFeaturesScpWorkshop2021/runs/2070746544?check_suite_focus=true#step:8:157

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