[Bioc-devel] including package in github

Kern, Lori Lor|@Shepherd @end|ng |rom Ro@we||P@rk@org
Sat Mar 6 15:28:24 CET 2021

Dependencies have to be actively on CRAN or Bioconductor.  I suggest reaching out to the CoxBoost maintainers to see if they will reinstate it in CRAN.

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From: xin wwa <whirlsyu using gmail.com>
Sent: Friday, March 5, 2021 9:48:21 PM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>; Kern, Lori <Lori.Shepherd using RoswellPark.org>
Subject: including package in github

Dear bioconductor team,

Recently, I want to upgrade our package EnMCB and add some functions.
However, the functions are based on a GitHub package ("Coxboost")
This package has been removed from CRAN, but I can find it on GitHub(https://github.com/binderh/CoxBoost<https://secure-web.cisco.com/1eAEd1vemzIBitHUVAm5_RHPbS6zL3E0nA0A5rAHt2iPyz7VRPKHef0J4Ez0SxrMo5ZVRYGESmxrcP-R1m4gQsZk9C-WsolH9ppxQ_oMrtaMIdxL_NKw_eN_kV2-nYZYtDTt0ZFd-6XjzRTbZM1glmzeky3G4Hu05p_UIVl9cRX_2UB3lj2iuhOw0KyYCZh3s4K_SJdiI0i7pJeHK7UEzfkMIfMBn5rxTp7H7C-H40w3O3_TCnQF3AbmGAso3PzislvQir982g8KjlRicPDU9c9uuLBYcmJfFolpd2-2koGooAkE0WWOXpv7_qTdSZEN2178SueFh-imMq8beqW5aMQ/https%3A%2F%2Fgithub.com%2Fbinderh%2FCoxBoost>)
Therefore, can I depend on this package? There is a way to include CoxBoost in our package?

Thanks in advance. Any help is appreciated!


Xin Yu
Ph.D. student of Biomedical Informatics
College of Bioinformatics - Huazhong Agricultural University
whirlsyu using gmail.com<mailto:whirlsyu using gmail.com>
yuxin using webmail.hzau.edu.cn<mailto:yuxin using webmail.hzau.edu.cn>
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