[Bioc-devel] Help fixing version and resync existing package epidecodeR

Nitesh Turaga n|te@h @end|ng |rom d@@d|c|@h@rv@rd@edu
Thu Jun 3 19:28:05 CEST 2021

Hi Kandarp,

Please email the bioc-devel using r-project.org for questions on git. 

You can try to use the documentation we have on our website, http://bioconductor.org/developers/how-to/git/sync-existing-repositories/. 

The problem is to sync your Github repo with the Bioconductor git repo, hence it’s solvable on your end. You’d need to make sure your reset your GitHub repo “ca8d4d8526a3374bb8830982405710740922fb57” and then merge with the Bioconductor repo.

I would suggest you follow the documentation as it’s much clearer. Please also remember the versioning scheme, http://bioconductor.org/developers/how-to/version-numbering/. You are only allowed to bump the “patch” version (major.minor.patch - versioning scheme). 



> On Jun 2, 2021, at 4:11 PM, Kandarp Joshi <kandarpbioinfo using gmail.com> wrote:
> Dear Nitesh,
> My package epidecodeR was accepted in bioconductor last month. I have made some changes to the package and am trying to push updates to bioconductor git. However, I screwed up while trying to push and now my github and bio git are out of sync and also I am getting an illegal version bump error. 
> Can you please help me out in solving this error?
> Git repo https://github.com/kandarpRJ/epidecodeR
> package: https://bioconductor.org/packages/release/bioc/html/epidecodeR.html
> -- 
> With regards,
> Dr. Kandarp Joshi
> Post doctoral fellow, GP Lab
> Institute for Integrated Cell-Material Sciences (iCeMS)
> iCeMS Complex 2, Kyoto University
> Yoshida-Honmachi, Sakyo-ku
> Kyoto, 606-8501, Japan

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